Data Related Infomation

Camellia sinensis var. sinensis cv. Longjing43                  GWHPACFB024605                   TRI CSS Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   No Gene Product Found
Locus Name:   GWHPACFB024605

KEGG Orthology

K01832  K13224  K15638  K16084  K00517  K07430  K12639  K17873  K23805  K15814  K22728  K07434  K07439  K22726  K09843  K13029  K20544  K22434  K22880  K06461  K13225  K21717  K22640  K22997  K17645  K09588  K00489  K23813  K23136  K14985  K07824  K20563  K21714  K13391  K20663  K07422  K17728  K17729  K17730  K17684  K21693  K04123  K13404  K20564  K00490  K22740  K17683  K00495  K13083  K22983  K13261  K22005  K17875  K17718  K17719  K10437  K18388  K17709  K15470  K07411  K10438  K00488  K17721  K22992  K09755  K05280  K12640  K21719  K17946  K20667  K07433  K00487  K20662  K10720  K13405  K09587  K07418  K20620  K17691  K20619  K15639  K20661  K12924  K17827  K20559  K23494  K21715  K23180  K17854  K00640  K22998  K17813  K17651  K23276  K22932  K09754  K12155  K24188  K20623  K15001  K17690  K07408  K07429  K13395  K07410  K23320  K22636  K23808  K07428  K23137  K24184  K21206  K22638  K20770  K22691  K21205  K23179  K09832  K14937  K13385  K15506  K22811  K24192  K15826  K15472  K23806  K15805  K22635  K00512  K23810  K21295  K17689  K24179  K00513  K20562  K22639  K12637  K22727  K23177  K17692  K23321  K14999  K20618  K13400  K20560  K11868  K13027  K24187  K16083  K21291  K17712  K15907  K20666  K17957  K24392  K12645  K09837  K17961  K13223  K15747  K20496  K11818  K23814  K13260  K17956  K00498  K07438  K15089  K07381  K20767  K20561  K17812  K14984  K22093  K21070  K04122  K09831  K21292  K23178  K23809  K07427  K07414  K12156  K15093  K22094  K20785  K13387  K07382  K15099  K13226  K17726  K23134  K16265  K21445  K01773  K21718  K12696  K12154  K11812  K21716  K22365  K16085  K15800  K22634  K21692  K22637  K13401  K17958  K23662  K21207  K20556  K11813  K21293  K13257  K22995  K12153  K21995  K23135  K13389  K20617  K23807  K13267  K20621  K22096  K22326  K20513  K13406  

Gene Family

p450,SATase_N,Hexapep,RVT_1,RT_RNaseH_2

Gene Attributes

Chromosome:GWHACFB00000008
Cds Coordinates:145375503-145480304
Nucleotide length:104801
Prodicted protein length:1989

Gene Ontology Classification

Database Annotation Match Start Match End GO
NullNullNullNullNull

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Name Match Start Match End E-value
NullNullNullNullNull

Interpro hits

Interpro Accession Name Match Start Match End Annotation
IPR043502SUPERFAMILY11841374DNA/RNA polymerase superfamily
IPR036396Gene3D6981180Cytochrome P450 superfamily
IPR036396Gene3D13931864Cytochrome P450 superfamily
IPR036396Gene3D18651989Cytochrome P450 superfamily
IPR011004SUPERFAMILY65301Trimeric LpxA-like superfamily
IPR000477Pfam11781251Reverse transcriptase domain
IPR001451Pfam249283Hexapeptide repeat
IPR036396SUPERFAMILY14071866Cytochrome P450 superfamily
IPR001128Pfam14091857Cytochrome P450
IPR001128Pfam327679Cytochrome P450
IPR001128Pfam18661988Cytochrome P450
IPR001128Pfam7141163Cytochrome P450
IPR036396SUPERFAMILY327679Cytochrome P450 superfamily
IPR036396Gene3D319685Cytochrome P450 superfamily
IPR017972ProSitePatterns18091818Cytochrome P450, conserved site
IPR036396SUPERFAMILY7141168Cytochrome P450 superfamily
IPR018357ProSitePatterns258286Hexapeptide transferase, conserved site
IPR001128PRINTS10351046Cytochrome P450
IPR001128PRINTS594611Cytochrome P450
IPR001128PRINTS11121121Cytochrome P450
IPR043128Gene3D11901253Reverse transcriptase/Diguanylate cyclase domain
IPR005881TIGRFAM137298Serine O-acetyltransferase
IPR043128Gene3D12671335Reverse transcriptase/Diguanylate cyclase domain
IPR042122Gene3D48198Serine acetyltransferase, N-terminal domain superfamily
IPR041577Pfam13141372Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR010493Pfam65169Serine acetyltransferase, N-terminal
IPR036396SUPERFAMILY18661988Cytochrome P450 superfamily
IPR017972ProSitePatterns11141123Cytochrome P450, conserved site
IPR002401PRINTS10751099Cytochrome P450, E-class, group I
IPR002401PRINTS10341052Cytochrome P450, E-class, group I
IPR002401PRINTS11111121Cytochrome P450, E-class, group I
IPR002401PRINTS583600Cytochrome P450, E-class, group I
IPR002401PRINTS355374Cytochrome P450, E-class, group I
IPR002401PRINTS379400Cytochrome P450, E-class, group I
IPR002401PRINTS11211144Cytochrome P450, E-class, group I
IPR002401PRINTS603629Cytochrome P450, E-class, group I
IPR010493SMART65169Serine acetyltransferase, N-terminal

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
XM_02826598098.04814860.0
XM_02826598096.733673.18e-169
XM_02823294896.49414830.0
XM_02823294895.8563625.37e-162
XM_02823294996.73610110.0
XM_02823294995.2744021.46e-177
XM_02823294997.2381814.68e-78
XM_02826595399.4499080.0
XM_02825711595.8958770.0
XM_02825711598.6743770.0
XM_02826597998.086250.0
XM_02824491897.2496180.0
XM_028255225966250.0
XM_02820707495.826220.0
XM_02823778897.7012617.34e-121
XR_00364923499.5122054.55e-98