Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB024886 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | No Gene Product Found |
Locus Name: | GWHPACFB024886 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
Chromosome: | GWHACFB00000009 |
Cds Coordinates: | 14817274-14821329 |
Nucleotide length: | 4055 |
Prodicted protein length: | 368 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR027443 | Gene3D | 6 | 334 | Isopenicillin N synthase-like |
IPR026992 | Pfam | 39 | 149 | Non-haem dioxygenase N-terminal domain |
IPR005123 | Pfam | 196 | 294 | Oxoglutarate/iron-dependent dioxygenase |
IPR005123 | ProSiteProfiles | 191 | 295 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
XM_028251604 | 99.368 | 1108 | 0.0 |
KY615688 | 99.188 | 1108 | 0.0 |
AY641730 | 99.188 | 1108 | 0.0 |
KY849375 | 99.097 | 1108 | 0.0 |
HQ290517 | 98.736 | 1108 | 0.0 |
JN944581 | 97.202 | 1108 | 0.0 |
AB524883 | 97.63 | 633 | 0.0 |