Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB027831 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10 |
| Locus Name: | GWHPACFB027831 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | GWHACFB00002788 |
| Cds Coordinates: | 57604-66932 |
| Nucleotide length: | 9328 |
| Prodicted protein length: | 394 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 1 | 394 | Peptidase S10 | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR029058 | SUPERFAMILY | 1 | 393 | Alpha/Beta hydrolase fold |
| IPR029058 | Gene3D | 1 | 244 | Alpha/Beta hydrolase fold |
| IPR001563 | PRINTS | 78 | 88 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 388 | 394 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 65 | 77 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 113 | 138 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | Pfam | 1 | 394 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 1 | 394 | Peptidase S10, serine carboxypeptidase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028240029 | 97.462 | 1182 | 0.0 |
| XM_028223563 | 95.77 | 1182 | 0.0 |
| KM289196 | 95.77 | 1182 | 0.0 |
| KX267893 | 95.601 | 1182 | 0.0 |
| XM_028223557 | 95.516 | 1182 | 0.0 |
| XM_028240030 | 96.941 | 850 | 0.0 |
| XM_028240030 | 99.061 | 213 | 1.46e-101 |
| XM_028223564 | 96 | 850 | 0.0 |
| XM_028223564 | 95.775 | 213 | 6.89e-90 |
| XM_028223536 | 95.087 | 346 | 6.33e-150 |