Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB027846 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB027846 |
Gene Family
Peptidase_S10,Sua5_yciO_yrdC
Gene Attributes
| Chromosome: | GWHACFB00002828 |
| Cds Coordinates: | 24609-35654 |
| Nucleotide length: | 11045 |
| Prodicted protein length: | 576 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR040362 | PANTHER | 435 | 556 | RAB11-binding protein RELCH |
| IPR029058 | SUPERFAMILY | 9 | 79 | Alpha/Beta hydrolase fold |
| IPR001563 | Pfam | 12 | 79 | Peptidase S10, serine carboxypeptidase |
| IPR006070 | Pfam | 171 | 240 | YrdC-like domain |
| IPR029058 | Gene3D | 6 | 93 | Alpha/Beta hydrolase fold |
| IPR017945 | SUPERFAMILY | 170 | 249 | DHBP synthase RibB-like alpha/beta domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237428 | 99.746 | 788 | 0.0 |
| XM_028237428 | 100 | 157 | 1.35e-73 |
| XM_028237427 | 99.746 | 788 | 0.0 |
| XM_028237427 | 100 | 157 | 1.35e-73 |
| XM_028237429 | 99.629 | 539 | 0.0 |
| XM_028237429 | 100 | 143 | 8.17e-66 |
| XM_028211787 | 98.201 | 556 | 0.0 |
| XM_028211785 | 98.201 | 556 | 0.0 |
| XM_028208885 | 97.982 | 446 | 0.0 |
| XM_028211786 | 98.125 | 320 | 1.20e-153 |
| XM_028211786 | 98.611 | 144 | 4.91e-63 |
| XR_003637180 | 99.16 | 238 | 2.74e-115 |
| XM_028230433 | 99.569 | 232 | 1.27e-113 |
| XM_028230433 | 100 | 126 | 2.30e-56 |
| XM_028230433 | 100 | 38 | 1.91e-07 |
| XM_028238861 | 99.567 | 231 | 4.58e-113 |
| XM_028238861 | 100 | 126 | 2.30e-56 |
| XM_028238861 | 100 | 38 | 1.91e-07 |
| XM_028195953 | 98.312 | 237 | 2.13e-111 |
| XM_028195945 | 98.312 | 237 | 2.13e-111 |
| XM_028195938 | 98.312 | 237 | 2.13e-111 |
| XM_028223538 | 97.209 | 215 | 7.83e-96 |
| XM_028267679 | 95.146 | 206 | 1.33e-83 |
| XM_028209395 | 96.875 | 192 | 4.78e-83 |
| XR_003628204 | 96.923 | 130 | 2.32e-51 |
| XR_003628204 | 100 | 75 | 5.16e-28 |
| XM_028213666 | 96 | 125 | 1.81e-47 |
| XR_003645076 | 96 | 125 | 1.81e-47 |
| XM_028252782 | 96 | 125 | 1.81e-47 |
| XR_003646708 | 98.02 | 101 | 1.42e-38 |
| XR_003646707 | 98.02 | 101 | 1.42e-38 |
| XR_003646706 | 98.02 | 101 | 1.42e-38 |
| XR_003646705 | 98.02 | 101 | 1.42e-38 |
| XR_003646704 | 98.02 | 101 | 1.42e-38 |
| XR_003646703 | 98.02 | 101 | 1.42e-38 |
| XM_028270591 | 100 | 86 | 3.96e-34 |
| XM_028200071 | 100 | 85 | 1.43e-33 |
| XR_003631034 | 100 | 76 | 1.44e-28 |
| XM_028208733 | 100 | 76 | 1.44e-28 |
| XM_028267032 | 97.333 | 75 | 1.12e-24 |