Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB029089 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Peptidase S10 |
| Locus Name: | GWHPACFB029089 |
Gene Family
Peptidase_S10
Gene Attributes
| Chromosome: | GWHACFB00007500 |
| Cds Coordinates: | 4777-15073 |
| Nucleotide length: | 10296 |
| Prodicted protein length: | 245 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
SP(Sec/SPI)
CS pos:29-30.
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00450.23 | 12 | 244 | Peptidase S10 | 1e-5 |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001563 | PRINTS | 130 | 140 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 165 | 190 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PRINTS | 117 | 129 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | Pfam | 36 | 244 | Peptidase S10, serine carboxypeptidase |
| IPR001563 | PANTHER | 15 | 244 | Peptidase S10, serine carboxypeptidase |
| IPR029058 | Gene3D | 26 | 245 | Alpha/Beta hydrolase fold |
| IPR029058 | SUPERFAMILY | 32 | 244 | Alpha/Beta hydrolase fold |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028228453 | 96.995 | 732 | 0.0 |
| XM_028228452 | 96.995 | 732 | 0.0 |
| XM_028228454 | 97.099 | 655 | 0.0 |
| XM_028215390 | 100 | 294 | 3.87e-150 |
| XM_028215382 | 97.619 | 294 | 1.83e-138 |