Data Related Infomation
Camellia sinensis var. sinensis cv. Longjing43 GWHPACFB032587 TRI CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | GWHPACFB032587 |
KEGG Orthology
K13223 K22691 K15089 K21717 K13226 K04122 K23806 K12696 K20561 K23814 K20496 K12156 K21716 K15001 K10720 K16083 K09754 K15805 K13387 K00513 K22639 K22093 K23139 K17854 K07427 K07414 K16084 K00517 K21692 K15099 K20619 K22740 K22811 K20544 K12640 K07381 K09755 K16265 K21291 K18388 K17651 K13260 K20563 K07410 K14937 K20621 K20662 K24179 K13405 K13257 K07433 K13406 K00512 K21206 K23810 K22995 K23494 K21205 K20767 K23135 K21995 K13385 K15470 K15093 K20617 K21714 K07408 K17691 K23136 K17728 K17690 K22096 K23179 K05280 K17689 K22637 K17961 K01773 K13083 K00487 K01832 K15472 K22983 K17730 K17729 K17683 K17692 K17712 K00490 K17719 K17718 K20556 K17709 K17721 K15800 K07411 K13401 K11812 K24187 K11813 K24188 K00495 K13029 K23807 K22094 K22326 K22636 K17960 K23137 K22932 K23177 K13224 K13389 K20770 K07422 K11818 K13225 K22634 K23805 K22365 K16085 K22640 K20560 K21718 K12153 K13267 K20562 K20623 K21715 K11868 K20513 K24184 K14985 K13404 K17813 K21164 K20620 K15506 K20559 K23180 K23134 K20618 K07382 K13261 K22638 K22635 K07418 K21693 K20564 K23178 K15814 K23662
Gene Family
p450
Gene Attributes
| Chromosome: | GWHACFB00028852 |
| Cds Coordinates: | 31723-43155 |
| Nucleotide length: | 11432 |
| Prodicted protein length: | 481 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR017972 | ProSitePatterns | 422 | 431 | Cytochrome P450, conserved site |
| IPR002401 | PRINTS | 279 | 296 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 383 | 407 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 342 | 360 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 429 | 452 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 419 | 429 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 64 | 85 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 160 | 178 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 40 | 59 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 299 | 325 | Cytochrome P450, E-class, group I |
| IPR036396 | SUPERFAMILY | 13 | 479 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 420 | 429 | Cytochrome P450 |
| IPR001128 | PRINTS | 343 | 354 | Cytochrome P450 |
| IPR001128 | PRINTS | 290 | 307 | Cytochrome P450 |
| IPR001128 | Pfam | 13 | 472 | Cytochrome P450 |
| IPR036396 | Gene3D | 2 | 479 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028214335 | 99.03 | 1444 | 0.0 |
| XM_028254672 | 96.26 | 1444 | 0.0 |
| XM_028254671 | 96.26 | 1444 | 0.0 |
| XM_028259408 | 95.076 | 589 | 0.0 |
| XM_028264624 | 99.045 | 419 | 0.0 |
| XM_028207208 | 95.413 | 218 | 6.54e-91 |