Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA003473.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA003473.1 |
KEGG Orthology
K14760 K16228 K15668 K04110 K15654 K18662 K14467 K16876 K15667 K20034 K22319 K15661 K24101 K16375 K15868 K12709 K16101 K14469 K21792 K22739 K12240 K00155 K15675 K15660 K16124 K23667 K21059 K04787 K02364 K04792 K15655 K15665 K12442 K22118 K15653 K19102 K15662 K22152 K16095 K16131 K15659 K22148 K12427 K03367 K01911 K15663 K16122 K12237 K10526 K01904 K01897 K15018 K04788 K19103 K12424 K12238 K16098 K15664 K15670 K18660 K16119 K16120 K04783 K04105 K04780 K05939 K05914 K01895 K23617 K22133 K12444 K03822 K16129 K16121 K13611 K12508 K01908 K12743 K23665 K16432 K02363 K16391 K04789 K22149 K15656 K08295 K12701 K00666 K12239 K12425 K04116 K12507 K02182 K18661 K18687 K16378 K01043 K15658 K18000 K15384 K16229 K15666 K16428 K04784 K12421 K15394 K16123 K16126 K16130 K16093 K16099 K16416 K16430 K16094 K15395
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Sc0000032 |
| Cds Coordinates: | 1831185-1842082 |
| Nucleotide length: | 10897 |
| Prodicted protein length: | 545 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR000873 | Pfam | 35 | 446 | AMP-dependent synthetase/ligase |
| IPR020845 | ProSitePatterns | 195 | 206 | AMP-binding, conserved site |
| IPR042099 | Gene3D | 10 | 441 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 455 | 530 | AMP-binding enzyme, C-terminal domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MH981229 | 99.694 | 1635 | 0.0 |
| XM_028249324 | 99.633 | 1635 | 0.0 |