Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA006900.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA006900.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_4,NAD_binding_10,GDP_Man_Dehyd,NmrA
Gene Attributes
| Chromosome: | Sc0000479 |
| Cds Coordinates: | 540826-551982 |
| Nucleotide length: | 11156 |
| Prodicted protein length: | 281 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 11 | 248 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 7 | 277 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MF977691 | 97.616 | 839 | 0.0 |
| XM_028240451 | 97.372 | 837 | 0.0 |
| XM_028240450 | 97.479 | 833 | 0.0 |
| MK889353 | 97.105 | 829 | 0.0 |
| XM_028240444 | 96.424 | 839 | 0.0 |
| XM_028221041 | 97.059 | 340 | 2.05e-158 |
| XR_003635095 | 97.059 | 340 | 2.05e-158 |
| XM_028262264 | 98.154 | 325 | 2.65e-157 |
| XR_003635096 | 97.661 | 171 | 4.96e-75 |