Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA007350.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA007350.1 |
KEGG Orthology
Gene Family
Epimerase,3Beta_HSD,GDP_Man_Dehyd,NAD_binding_10,NAD_binding_4,Polysacc_synt_2,NmrA,KR,adh_short
Gene Attributes
| Chromosome: | Sc0001900 |
| Cds Coordinates: | 62198-69496 |
| Nucleotide length: | 7298 |
| Prodicted protein length: | 326 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 10 | 247 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 1 | 319 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028216763 | 99.08 | 978 | 0.0 |
| XM_028216764 | 98.614 | 505 | 0.0 |
| XM_028216764 | 98.653 | 297 | 5.24e-145 |