Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA009695.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA009695.1 |
Gene Family
ELFV_dehydrog,ELFV_dehydrog_N
Gene Attributes
| Chromosome: | Sc0004705 |
| Cds Coordinates: | 22979-27217 |
| Nucleotide length: | 4238 |
| Prodicted protein length: | 421 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR006097 | Pfam | 42 | 167 | Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain |
| IPR014362 | PIRSF | 7 | 420 | Glutamate dehydrogenase |
| IPR033922 | CDD | 185 | 411 | NAD(P) binding domain of glutamate dehydrogenase |
| IPR006095 | PRINTS | 218 | 238 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 97 | 111 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 176 | 198 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR006095 | PRINTS | 345 | 356 | Glutamate/phenylalanine/leucine/valine dehydrogenase |
| IPR036291 | SUPERFAMILY | 185 | 418 | NAD(P)-binding domain superfamily |
| IPR006096 | SMART | 187 | 417 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR006096 | Pfam | 185 | 417 | Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal |
| IPR033524 | ProSitePatterns | 105 | 118 | Leu/Phe/Val dehydrogenases active site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028254452 | 99.603 | 1258 | 0.0 |
| XM_028254451 | 99.603 | 1258 | 0.0 |
| XM_028254448 | 99.603 | 1258 | 0.0 |
| XM_028254450 | 99.523 | 1258 | 0.0 |
| XM_028254449 | 99.523 | 1258 | 0.0 |
| XM_028254446 | 99.523 | 1258 | 0.0 |
| XM_028254453 | 99.558 | 1130 | 0.0 |
| XM_028236779 | 99.111 | 787 | 0.0 |
| XM_028236780 | 99.281 | 695 | 0.0 |