Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA010560.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA010560.1 |
KEGG Orthology
K20767 K23662 K22932 K15800 K20619 K22094 K13029 K20561 K17961 K15472 K20618 K22640 K01773 K17812 K13401 K12156 K13406 K22639 K14937 K17813 K12153 K12154 K20621 K11812 K20785 K04122 K11813 K22995 K21717 K13225 K22691 K21291 K00512 K15814 K13404 K21205 K13223 K15805 K16083 K23494 K07409 K15470 K00487 K23177 K18388 K21718 K22638 K22811 K22365 K13389 K07418 K15099 K09754 K23137 K24184 K13257 K24179 K05280 K13083 K20617 K22637 K20662 K07422 K22740 K07433 K07410 K07408 K13267 K20544 K22636 K16265 K20770 K23135 K23805 K07414 K13260 K23810 K12640 K17691 K17690 K17689 K17728 K17730 K17729 K17692 K23180 K17651 K00490 K23806 K17719 K17718 K17721 K17683 K17712 K23814 K23807 K20564 K20556 K21715 K22326 K07382 K17709 K22096 K15093 K20563 K16085 K13027 K13405 K21206 K23136 K11818 K22634 K09755 K13385 K13261 K13226 K20623 K23134 K20559 K20496 K22983 K23179 K20562 K24188 K14985 K20513 K16084 K15089 K07411 K24187 K20620 K13387 K13224 K12696 K00495 K11868 K00517 K07381 K21995 K20560 K21714 K21692 K22635 K15506 K21716 K21693
Gene Family
p450
Gene Attributes
| Chromosome: | Sc0000052 |
| Cds Coordinates: | 840279-843530 |
| Nucleotide length: | 3251 |
| Prodicted protein length: | 507 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002401 | PRINTS | 434 | 444 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 311 | 337 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 86 | 107 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 354 | 372 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 291 | 308 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 395 | 419 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 62 | 81 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 444 | 467 | Cytochrome P450, E-class, group I |
| IPR036396 | Gene3D | 22 | 501 | Cytochrome P450 superfamily |
| IPR036396 | SUPERFAMILY | 35 | 498 | Cytochrome P450 superfamily |
| IPR001128 | PRINTS | 302 | 319 | Cytochrome P450 |
| IPR001128 | PRINTS | 435 | 444 | Cytochrome P450 |
| IPR001128 | PRINTS | 355 | 366 | Cytochrome P450 |
| IPR001128 | Pfam | 35 | 486 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 437 | 446 | Cytochrome P450, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028201533 | 98.422 | 1521 | 0.0 |
| KY615697 | 98.356 | 1521 | 0.0 |
| XM_019343095 | 95.238 | 42 | 2.17e-06 |
| XM_019343094 | 95.238 | 42 | 2.17e-06 |