Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA011508.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA011508.1 |
Gene Family
2OG-FeII_Oxy,DIOX_N
Gene Attributes
| Chromosome: | Sc0001853 |
| Cds Coordinates: | 326002-327929 |
| Nucleotide length: | 1927 |
| Prodicted protein length: | 356 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 5 | 352 | Isopenicillin N synthase-like |
| IPR005123 | Pfam | 214 | 310 | Oxoglutarate/iron-dependent dioxygenase |
| IPR026992 | Pfam | 50 | 163 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | ProSiteProfiles | 211 | 310 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN266484 | 100 | 1068 | 0.0 |
| MN864231 | 100 | 1068 | 0.0 |
| KR902746 | 99.438 | 1068 | 0.0 |
| KY615704 | 98.97 | 1068 | 0.0 |
| JN944577 | 98.97 | 1068 | 0.0 |
| XM_028216924 | 99.898 | 983 | 0.0 |
| MG686525 | 98.783 | 822 | 0.0 |
| MG686530 | 98.54 | 822 | 0.0 |
| MG686526 | 98.54 | 822 | 0.0 |
| MG686531 | 98.297 | 822 | 0.0 |
| MG686527 | 98.297 | 822 | 0.0 |
| MG686532 | 98.054 | 822 | 0.0 |
| MG686528 | 98.054 | 822 | 0.0 |
| MG686529 | 97.932 | 822 | 0.0 |
| MG686533 | 97.81 | 822 | 0.0 |
| MG686534 | 97.567 | 822 | 0.0 |
| MG686535 | 97.445 | 822 | 0.0 |
| MG686536 | 97.202 | 822 | 0.0 |
| MG686537 | 97.08 | 822 | 0.0 |
| MG686538 | 96.959 | 822 | 0.0 |
| MG686539 | 96.715 | 822 | 0.0 |
| AB524886 | 99.145 | 468 | 0.0 |