Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA011986.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA011986.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_4,NAD_binding_10
Gene Attributes
| Chromosome: | Sc0004160 |
| Cds Coordinates: | 19541-21532 |
| Nucleotide length: | 1991 |
| Prodicted protein length: | 319 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 13 | 238 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 9 | 311 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028199098 | 97.198 | 571 | 0.0 |
| XM_028199098 | 100 | 361 | 0.0 |
| MH236747 | 97.198 | 571 | 0.0 |
| MH236747 | 99.723 | 361 | 0.0 |
| GU944768 | 97.198 | 571 | 0.0 |
| GU944768 | 100 | 361 | 0.0 |
| HM003282 | 97.023 | 571 | 0.0 |
| HM003282 | 97.784 | 361 | 6.35e-174 |
| KY615701 | 96.848 | 571 | 0.0 |
| KY615701 | 99.169 | 361 | 0.0 |
| AY641729 | 96.848 | 571 | 0.0 |
| AY641729 | 99.169 | 361 | 0.0 |
| GU992400 | 96.673 | 571 | 0.0 |
| GU992400 | 100 | 361 | 0.0 |
| MG925481 | 96.187 | 577 | 0.0 |
| MG925481 | 99.446 | 361 | 0.0 |