Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA013326.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA013326.1 |
Gene Family
2OG-FeII_Oxy
Gene Attributes
| Chromosome: | Sc0005516 |
| Cds Coordinates: | 332-1259 |
| Nucleotide length: | 927 |
| Prodicted protein length: | 136 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR027443 | Gene3D | 1 | 67 | Isopenicillin N synthase-like |
| IPR027443 | Gene3D | 68 | 135 | Isopenicillin N synthase-like |
| IPR005123 | ProSiteProfiles | 58 | 135 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 31 | 66 | Oxoglutarate/iron-dependent dioxygenase |
| IPR005123 | Pfam | 67 | 132 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028200856 | 97.222 | 216 | 4.79e-97 |
| XM_028200856 | 96.465 | 198 | 2.26e-85 |
| KY615689 | 97.98 | 198 | 2.24e-90 |
| KY615689 | 96.97 | 198 | 4.86e-87 |
| XM_028250542 | 97.475 | 198 | 1.04e-88 |
| XM_028250542 | 96.465 | 198 | 2.26e-85 |
| AB524884 | 97.475 | 198 | 1.04e-88 |
| AB524884 | 97.475 | 198 | 1.04e-88 |