Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA017263.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA017263.1 |
KEGG Orthology
K00495 K17721 K12156 K15089 K23807 K11868 K23179 K15800 K15472 K01773 K13224 K17651 K17719 K20513 K11813 K17691 K17729 K23135 K13029 K20559 K24187 K23805 K13226 K18388 K24179 K20662 K15470 K22740 K12640 K17728 K22637 K22635 K17730 K20556 K15099 K22983 K17690 K13401 K13261 K22636 K21693 K23662 K15814 K23136 K20564 K15805 K16084 K20618 K13083 K24188 K13404 K07433 K11818 K13223 K22638 K11812 K13225 K09754 K15506 K22639 K00490 K23810 K20562 K05280 K20623 K22691 K20617 K17689 K17692 K07411 K17718 K17683 K17709 K17712 K20544
Gene Family
p450
Gene Attributes
| Chromosome: | Sc0002348 |
| Cds Coordinates: | 350460-351014 |
| Nucleotide length: | 554 |
| Prodicted protein length: | 185 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR002401 | PRINTS | 117 | 127 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 81 | 105 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 40 | 58 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 127 | 150 | Cytochrome P450, E-class, group I |
| IPR036396 | Gene3D | 1 | 180 | Cytochrome P450 superfamily |
| IPR017972 | ProSitePatterns | 120 | 129 | Cytochrome P450, conserved site |
| IPR001128 | Pfam | 2 | 173 | Cytochrome P450 |
| IPR001128 | PRINTS | 127 | 138 | Cytochrome P450 |
| IPR001128 | PRINTS | 6 | 19 | Cytochrome P450 |
| IPR001128 | PRINTS | 41 | 52 | Cytochrome P450 |
| IPR001128 | PRINTS | 118 | 127 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 1 | 179 | Cytochrome P450 superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028201318 | 99.459 | 555 | 0.0 |
| XM_025778245 | 95.455 | 44 | 5.86e-08 |
| CP030984 | 95.455 | 44 | 5.86e-08 |
| XM_025770982 | 95.455 | 44 | 5.86e-08 |
| XM_016095302 | 95.455 | 44 | 5.86e-08 |
| XM_016328636 | 95.455 | 44 | 5.86e-08 |
| XM_016597113 | 95.238 | 42 | 7.58e-07 |