Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA022024.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA022024.1 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | Sc0000974 |
| Cds Coordinates: | 448011-449813 |
| Nucleotide length: | 1802 |
| Prodicted protein length: | 601 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | PANTHER | 18 | 600 | Aromatic amino acid lyase |
| IPR001106 | CDD | 18 | 410 | Aromatic amino acid lyase |
| IPR001106 | Pfam | 22 | 422 | Aromatic amino acid lyase |
| IPR005922 | TIGRFAM | 18 | 590 | Phenylalanine ammonia-lyase |
| IPR024083 | Gene3D | 12 | 146 | Fumarase/histidase, N-terminal |
| IPR022313 | ProSitePatterns | 82 | 98 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR023144 | Gene3D | 413 | 527 | Phenylalanine ammonia-lyase, shielding domain superfamily |
| IPR008948 | SUPERFAMILY | 18 | 600 | L-Aspartase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| MN207177 | 99.715 | 1752 | 0.0 |
| XM_028202856 | 99.658 | 1752 | 0.0 |
| KY865305 | 99.6 | 1752 | 0.0 |
| KY615672 | 99.486 | 1752 | 0.0 |