Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA022025.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA022025.1 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | Sc0000974 |
| Cds Coordinates: | 452731-453115 |
| Nucleotide length: | 384 |
| Prodicted protein length: | 108 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR024083 | Gene3D | 1 | 107 | Fumarase/histidase, N-terminal |
| IPR001106 | PANTHER | 2 | 106 | Aromatic amino acid lyase |
| IPR008948 | SUPERFAMILY | 2 | 106 | L-Aspartase-like |
| IPR001106 | Pfam | 33 | 106 | Aromatic amino acid lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028202856 | 100 | 317 | 2.63e-163 |
| KY865305 | 99.685 | 317 | 1.22e-161 |
| MN207177 | 99.369 | 317 | 5.68e-160 |
| XM_028249187 | 99.369 | 317 | 5.68e-160 |
| KY615672 | 98.423 | 317 | 5.73e-155 |