Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA023536.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA023536.1 |
KEGG Orthology
Gene Family
Chalcone
Gene Attributes
| Chromosome: | Sc0000000 |
| Cds Coordinates: | 2730800-2732033 |
| Nucleotide length: | 1233 |
| Prodicted protein length: | 141 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR036298 | SUPERFAMILY | 6 | 135 | Chalcone isomerase superfamily |
| IPR016087 | Pfam | 6 | 133 | Chalcone isomerase |
| IPR016089 | Gene3D | 111 | 136 | Chalcone isomerase, orthogonal bundle domain superfamily |
| IPR044164 | PANTHER | 6 | 137 | Chalcone--flavonone isomerase |
| IPR016088 | Gene3D | 3 | 110 | Chalcone isomerase, 3-layer sandwich |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028263815 | 98.254 | 401 | 0.0 |
| HQ269805 | 95.477 | 398 | 3.44e-178 |
| XM_028263816 | 96.861 | 223 | 2.98e-99 |
| XM_028263816 | 100 | 120 | 1.14e-53 |