Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA024903.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA024903.1 |
KEGG Orthology
K20496 K22691 K07382 K23805 K13260 K22326 K15805 K21716 K16085 K17961 K18388 K22740 K11868 K20544 K12640 K21717 K09754 K22094 K15470 K24179 K07433 K17729 K17858 K15099 K22639 K20559 K21293 K17813 K22365 K17730 K17728 K20621 K07413 K10720 K20662 K13405 K07419 K17852 K00490 K17651 K23178 K12153 K17691 K15814 K21291 K17690 K17689 K00513 K17692 K17683 K15089 K20561 K20560 K23810 K17712 K24187 K20563 K07408 K17854 K13387 K01832 K17719 K17718 K14937 K13404 K17709 K23662 K07418 K20619 K20618 K22640 K20564 K20767 K09755 K22995 K23180 K21206 K17721 K11818 K20617 K12156 K16083 K11813 K13223 K11812 K07411 K24184 K22983 K16265 K17720 K07410 K23136 K21714 K15800 K21718 K21692 K23814 K20556 K07412 K04122 K17856 K07440 K13401 K22093 K17857 K07409 K22634 K13027 K23139 K21205 K17859 K20771 K15001 K22096 K17853 K00495 K05280 K24188 K23806 K22636 K20770 K07414 K07427 K16084 K22932 K23179 K12696 K22811 K15506 K22638 K13083 K07381 K23177 K15472 K15093 K21715 K13261 K13029 K13385 K13389 K23807 K20623 K01773 K20562 K13267 K23135 K20513 K20620 K14985 K07417 K17812 K13406 K13257 K13226 K13225 K00517 K00512 K13224 K23494 K00487 K22635 K21995 K22637 K21693 K23137 K23134 K07422
Gene Family
p450
Gene Attributes
| Chromosome: | Sc0002173 |
| Cds Coordinates: | 166158-167829 |
| Nucleotide length: | 1671 |
| Prodicted protein length: | 476 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001128 | Pfam | 28 | 471 | Cytochrome P450 |
| IPR036396 | SUPERFAMILY | 28 | 466 | Cytochrome P450 superfamily |
| IPR036396 | Gene3D | 18 | 475 | Cytochrome P450 superfamily |
| IPR002401 | PRINTS | 306 | 332 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 349 | 367 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 80 | 101 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 174 | 192 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 56 | 75 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 436 | 459 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 390 | 414 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 426 | 436 | Cytochrome P450, E-class, group I |
| IPR002401 | PRINTS | 286 | 303 | Cytochrome P450, E-class, group I |
| IPR001128 | PRINTS | 297 | 314 | Cytochrome P450 |
| IPR001128 | PRINTS | 350 | 361 | Cytochrome P450 |
| IPR001128 | PRINTS | 427 | 436 | Cytochrome P450 |
| IPR017972 | ProSitePatterns | 429 | 438 | Cytochrome P450, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028229817 | 99.72 | 1428 | 0.0 |
| XM_028244775 | 96.226 | 53 | 1.56e-12 |
| XM_028253227 | 96.226 | 53 | 1.56e-12 |
| XM_028253226 | 96.226 | 53 | 1.56e-12 |
| XM_028253225 | 96.226 | 53 | 1.56e-12 |
| XR_003645251 | 96.226 | 53 | 1.56e-12 |
| XM_028253223 | 96.226 | 53 | 1.56e-12 |
| XM_028253222 | 96.226 | 53 | 1.56e-12 |