Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA026735.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA026735.1 |
KEGG Orthology
Gene Family
Chalcone,Chalcone_2
Gene Attributes
| Chromosome: | Sc0000153 |
| Cds Coordinates: | 115170-119412 |
| Nucleotide length: | 4242 |
| Prodicted protein length: | 226 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016089 | Gene3D | 55 | 95 | Chalcone isomerase, orthogonal bundle domain superfamily |
| IPR036298 | SUPERFAMILY | 95 | 224 | Chalcone isomerase superfamily |
| IPR036298 | SUPERFAMILY | 4 | 96 | Chalcone isomerase superfamily |
| IPR016088 | Gene3D | 96 | 200 | Chalcone isomerase, 3-layer sandwich |
| IPR016088 | Gene3D | 2 | 54 | Chalcone isomerase, 3-layer sandwich |
| IPR016087 | Pfam | 8 | 95 | Chalcone isomerase |
| IPR044191 | PANTHER | 95 | 225 | Chalcone--flavonone isomerase 3-like |
| IPR044191 | PANTHER | 1 | 96 | Chalcone--flavonone isomerase 3-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| KY615686 | 99.744 | 390 | 0.0 |
| KY615686 | 100 | 289 | 2.14e-147 |
| XM_028214440 | 99.487 | 390 | 0.0 |
| XM_028214440 | 100 | 289 | 2.14e-147 |
| MG720782 | 97.949 | 390 | 0.0 |
| MG720782 | 99.654 | 289 | 9.95e-146 |
| MG720784 | 97.436 | 390 | 0.0 |
| MG720784 | 98.962 | 289 | 2.15e-142 |
| MG720776 | 97.436 | 390 | 0.0 |
| MG720776 | 100 | 289 | 2.14e-147 |
| MG720778 | 97.179 | 390 | 0.0 |
| MG720778 | 98.27 | 289 | 4.66e-139 |
| MG720777 | 97.179 | 390 | 0.0 |
| MG720777 | 98.616 | 289 | 1.00e-140 |
| MG720785 | 96.923 | 390 | 0.0 |
| MG720785 | 98.616 | 289 | 1.00e-140 |
| MG720783 | 96.923 | 390 | 0.0 |
| MG720783 | 99.308 | 289 | 4.63e-144 |
| MG720779 | 96.923 | 390 | 0.0 |
| MG720779 | 99.308 | 289 | 4.63e-144 |
| MG720780 | 96.667 | 390 | 0.0 |
| MG720780 | 98.962 | 289 | 2.15e-142 |
| MG720781 | 96.41 | 390 | 3.41e-180 |
| MG720781 | 98.616 | 289 | 1.00e-140 |
| XM_028270426 | 97.97 | 197 | 1.39e-89 |
| XM_028270426 | 96.809 | 94 | 5.41e-34 |
| XM_028232603 | 98.077 | 156 | 1.85e-68 |