Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA027283.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA027283.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_N,Chal_sti_synt_C,ACP_syn_III,FAE1_CUT1_RppA
Gene Attributes
| Chromosome: | xpSc0057299 |
| Cds Coordinates: | 3313-4302 |
| Nucleotide length: | 989 |
| Prodicted protein length: | 330 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | SUPERFAMILY | 175 | 326 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 2 | 171 | Thiolase-like |
| IPR012328 | Pfam | 178 | 327 | Chalcone/stilbene synthase, C-terminal |
| IPR001099 | Pfam | 1 | 167 | Chalcone/stilbene synthase, N-terminal |
| IPR011141 | PANTHER | 1 | 328 | Polyketide synthase, type III |
| IPR011141 | PIRSF | 1 | 329 | Polyketide synthase, type III |
| IPR016039 | Gene3D | 1 | 175 | Thiolase-like |
| IPR016039 | Gene3D | 176 | 329 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028270488 | 98.081 | 990 | 0.0 |
| XM_028237596 | 98.639 | 882 | 0.0 |
| AY146700 | 97.419 | 775 | 0.0 |
| AY146707 | 96.903 | 775 | 0.0 |
| AY146712 | 95.871 | 775 | 0.0 |