Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA028450.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA028450.1 |
Gene Family
Lyase_aromatic
Gene Attributes
| Chromosome: | Sc0001050 |
| Cds Coordinates: | 206985-209773 |
| Nucleotide length: | 2788 |
| Prodicted protein length: | 723 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR022313 | ProSitePatterns | 204 | 220 | Phenylalanine/histidine ammonia-lyases, active site |
| IPR001106 | CDD | 87 | 532 | Aromatic amino acid lyase |
| IPR024083 | Gene3D | 30 | 268 | Fumarase/histidase, N-terminal |
| IPR001106 | Pfam | 69 | 544 | Aromatic amino acid lyase |
| IPR001106 | PANTHER | 22 | 722 | Aromatic amino acid lyase |
| IPR008948 | SUPERFAMILY | 31 | 722 | L-Aspartase-like |
| IPR005922 | TIGRFAM | 31 | 712 | Phenylalanine ammonia-lyase |
| IPR023144 | Gene3D | 535 | 649 | Phenylalanine ammonia-lyase, shielding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028214819 | 99.447 | 2169 | 0.0 |
| MN207174 | 99.716 | 2112 | 0.0 |
| KY615673 | 99.242 | 2111 | 0.0 |