Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA029707.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA029707.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_C,Chal_sti_synt_N,ACP_syn_III_C,ACP_syn_III,FAE1_CUT1_RppA
Gene Attributes
| Chromosome: | Sc0001728 |
| Cds Coordinates: | 49240-50527 |
| Nucleotide length: | 1287 |
| Prodicted protein length: | 304 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | Gene3D | 150 | 303 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 149 | 300 | Thiolase-like |
| IPR012328 | Pfam | 152 | 301 | Chalcone/stilbene synthase, C-terminal |
| IPR018088 | ProSitePatterns | 70 | 86 | Chalcone/stilbene synthase, active site |
| IPR016039 | Gene3D | 28 | 146 | Thiolase-like |
| IPR011141 | PANTHER | 33 | 302 | Polyketide synthase, type III |
| IPR001099 | Pfam | 34 | 142 | Chalcone/stilbene synthase, N-terminal |
| IPR016039 | SUPERFAMILY | 33 | 147 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028224715 | 99.877 | 814 | 0.0 |
| KY615682 | 99.877 | 814 | 0.0 |
| KC357708 | 99.877 | 814 | 0.0 |
| D26594 | 99.877 | 814 | 0.0 |
| MG720805 | 98.771 | 814 | 0.0 |
| HQ704701 | 98.649 | 814 | 0.0 |
| JN944574 | 98.403 | 814 | 0.0 |
| MG720807 | 98.28 | 814 | 0.0 |
| MG720806 | 98.28 | 814 | 0.0 |
| MG720802 | 99.081 | 762 | 0.0 |
| MG720792 | 99.081 | 762 | 0.0 |
| MG720803 | 98.819 | 762 | 0.0 |
| AY146708 | 98.319 | 714 | 0.0 |
| AY146704 | 97.339 | 714 | 0.0 |
| GU722502 | 100 | 638 | 0.0 |
| GU722466 | 99.843 | 638 | 0.0 |
| GU722451 | 99.843 | 638 | 0.0 |
| GU722480 | 99.687 | 638 | 0.0 |
| GU722476 | 99.687 | 638 | 0.0 |
| GU722467 | 99.216 | 638 | 0.0 |
| GU722460 | 99.216 | 638 | 0.0 |
| GU722449 | 99.216 | 638 | 0.0 |
| GU722491 | 99.06 | 638 | 0.0 |
| GU722474 | 99.06 | 638 | 0.0 |
| GU722456 | 99.06 | 638 | 0.0 |
| GU722453 | 99.06 | 638 | 0.0 |
| GU722510 | 98.903 | 638 | 0.0 |
| GU722507 | 98.903 | 638 | 0.0 |
| GU722458 | 98.903 | 638 | 0.0 |
| GU722496 | 98.903 | 638 | 0.0 |
| GU722492 | 98.903 | 638 | 0.0 |
| GU722486 | 98.903 | 638 | 0.0 |
| GU722475 | 98.903 | 638 | 0.0 |
| GU722464 | 98.903 | 638 | 0.0 |
| GU722463 | 98.903 | 638 | 0.0 |
| GU722450 | 98.903 | 638 | 0.0 |
| GU722511 | 98.746 | 638 | 0.0 |
| GU722465 | 98.746 | 638 | 0.0 |
| GU722499 | 98.746 | 638 | 0.0 |
| GU722494 | 98.746 | 638 | 0.0 |
| GU722481 | 98.746 | 638 | 0.0 |
| GU722461 | 98.746 | 638 | 0.0 |
| GU722457 | 98.746 | 638 | 0.0 |
| GU722503 | 98.589 | 638 | 0.0 |
| GU722512 | 98.589 | 638 | 0.0 |
| GU722469 | 98.589 | 638 | 0.0 |
| GU722498 | 98.589 | 638 | 0.0 |
| GU722488 | 98.589 | 638 | 0.0 |
| GU722472 | 98.589 | 638 | 0.0 |
| GU722483 | 98.589 | 638 | 0.0 |
| GU722473 | 98.589 | 638 | 0.0 |
| GU722468 | 98.589 | 638 | 0.0 |
| GU722495 | 98.433 | 638 | 0.0 |
| GU722493 | 98.433 | 638 | 0.0 |
| GU722490 | 98.433 | 638 | 0.0 |
| GU722477 | 98.433 | 638 | 0.0 |
| GU722471 | 98.433 | 638 | 0.0 |
| GU722454 | 98.433 | 638 | 0.0 |
| GU722501 | 98.276 | 638 | 0.0 |
| GU722462 | 98.276 | 638 | 0.0 |
| GU722505 | 98.119 | 638 | 0.0 |
| GU722504 | 98.119 | 638 | 0.0 |
| GU722470 | 98.119 | 638 | 0.0 |
| GU722459 | 98.119 | 638 | 0.0 |
| GU722448 | 98.119 | 638 | 0.0 |
| GU722484 | 97.962 | 638 | 0.0 |
| GU722482 | 97.962 | 638 | 0.0 |
| GU722478 | 97.962 | 638 | 0.0 |
| GU722489 | 97.806 | 638 | 0.0 |
| GU722455 | 97.806 | 638 | 0.0 |
| GU722452 | 97.806 | 638 | 0.0 |
| GU722497 | 97.649 | 638 | 0.0 |
| GU722508 | 97.492 | 638 | 0.0 |
| GU722485 | 97.335 | 638 | 0.0 |
| GU722513 | 96.238 | 638 | 0.0 |
| AY570930 | 97.006 | 334 | 4.81e-155 |
| GU932717 | 97.59 | 83 | 2.06e-29 |