Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA029772.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA029772.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_N
Gene Attributes
| Chromosome: | Sc0000002 |
| Cds Coordinates: | 293707-294268 |
| Nucleotide length: | 561 |
| Prodicted protein length: | 65 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | Gene3D | 1 | 63 | Thiolase-like |
| IPR001099 | Pfam | 5 | 60 | Chalcone/stilbene synthase, N-terminal |
| IPR011141 | PANTHER | 2 | 60 | Polyketide synthase, type III |
| IPR016039 | SUPERFAMILY | 1 | 61 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028211684 | 98.985 | 197 | 5.79e-93 |
| KY615683 | 98.985 | 197 | 5.79e-93 |
| KC357709 | 98.985 | 197 | 5.79e-93 |
| D26595 | 98.985 | 197 | 5.79e-93 |
| AY656677 | 98.477 | 197 | 2.69e-91 |
| KC357706 | 100 | 177 | 9.76e-86 |
| JN944575 | 96.447 | 197 | 1.26e-84 |
| XM_028211685 | 95.139 | 144 | 3.66e-55 |