Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA029775.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA029775.1 |
KEGG Orthology
Gene Family
Chal_sti_synt_N,Chal_sti_synt_C,FAE1_CUT1_RppA
Gene Attributes
| Chromosome: | Sc0000002 |
| Cds Coordinates: | 306986-307897 |
| Nucleotide length: | 911 |
| Prodicted protein length: | 304 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR018088 | ProSitePatterns | 70 | 86 | Chalcone/stilbene synthase, active site |
| IPR016039 | SUPERFAMILY | 1 | 145 | Thiolase-like |
| IPR001099 | Pfam | 1 | 142 | Chalcone/stilbene synthase, N-terminal |
| IPR016039 | Gene3D | 150 | 303 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 150 | 300 | Thiolase-like |
| IPR011141 | PANTHER | 1 | 302 | Polyketide synthase, type III |
| IPR012328 | Pfam | 152 | 301 | Chalcone/stilbene synthase, C-terminal |
| IPR016039 | Gene3D | 1 | 145 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028269414 | 96.382 | 912 | 0.0 |
| XM_028211685 | 95.943 | 912 | 0.0 |
| AY146709 | 98.067 | 776 | 0.0 |
| AY146701 | 97.68 | 776 | 0.0 |