Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA031578.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA031578.1 |
KEGG Orthology
K15661 K16416 K16095 K15664 K15655 K02363 K04788 K01895 K14467 K15656 K15667 K02364 K04784 K15663 K01911 K15018 K00155 K15395 K16093 K12239 K12709 K16876 K16123 K12240 K12421 K16391 K16101 K14469 K15658 K16129 K15659 K16119 K16099 K12427 K22148 K15013 K03367 K16120 K03822 K16428 K10526 K01904 K01897 K15653 K16124 K22739 K15868 K22149 K21792 K15666 K04780 K15670 K01043 K16432 K23618 K18660 K15665 K15654 K01896 K23617 K18661 K02182 K16228 K23665 K12442 K16098 K24101 K21059 K04789 K16229 K23667 K12444 K18662 K04792 K15668 K12238 K16375 K08295 K16131 K00666 K22152 K12425 K22133 K12507 K04116 K05914 K18687 K19103 K19102 K16126 K12743 K16430 K16130 K15660 K16094 K15675 K15394 K16122 K15662 K15384 K12701 K12237 K18000 K22118 K16121 K13611 K16378
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | xfSc0000860 |
| Cds Coordinates: | 92341-100123 |
| Nucleotide length: | 7782 |
| Prodicted protein length: | 621 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR042099 | Gene3D | 199 | 514 | AMP-dependent synthetase-like superfamily |
| IPR042099 | Gene3D | 1 | 198 | AMP-dependent synthetase-like superfamily |
| IPR025110 | Pfam | 529 | 604 | AMP-binding enzyme, C-terminal domain |
| IPR000873 | Pfam | 33 | 198 | AMP-dependent synthetase/ligase |
| IPR000873 | Pfam | 199 | 520 | AMP-dependent synthetase/ligase |
| IPR020845 | ProSitePatterns | 264 | 275 | AMP-binding, conserved site |
| IPR020845 | ProSitePatterns | 186 | 197 | AMP-binding, conserved site |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028215194 | 99.372 | 1274 | 0.0 |
| XM_028215194 | 99.699 | 332 | 3.53e-169 |
| XM_028215194 | 98.565 | 209 | 6.52e-97 |
| KY615678 | 99.215 | 1274 | 0.0 |
| KY615678 | 99.493 | 592 | 0.0 |
| XM_028251405 | 98.63 | 365 | 0.0 |
| XM_028251405 | 97.476 | 317 | 3.63e-149 |
| XM_028251405 | 95.279 | 233 | 6.52e-97 |