Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA031661.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA031661.1 |
Gene Family
Chal_sti_synt_N,Chal_sti_synt_C
Gene Attributes
| Chromosome: | Sc0000078 |
| Cds Coordinates: | 154834-155813 |
| Nucleotide length: | 979 |
| Prodicted protein length: | 283 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR016039 | Gene3D | 1 | 165 | Thiolase-like |
| IPR016039 | Gene3D | 166 | 216 | Thiolase-like |
| IPR016039 | SUPERFAMILY | 1 | 155 | Thiolase-like |
| IPR012328 | Pfam | 168 | 214 | Chalcone/stilbene synthase, C-terminal |
| IPR016039 | SUPERFAMILY | 165 | 262 | Thiolase-like |
| IPR011141 | PANTHER | 214 | 261 | Polyketide synthase, type III |
| IPR011141 | PANTHER | 1 | 215 | Polyketide synthase, type III |
| IPR001099 | Pfam | 1 | 157 | Chalcone/stilbene synthase, N-terminal |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028237596 | 95.455 | 154 | 5.10e-60 |
| AY146712 | 96.429 | 56 | 1.96e-14 |
| AY146700 | 96.429 | 56 | 1.96e-14 |
| AY146711 | 96.429 | 56 | 1.96e-14 |
| AY146711 | 97.368 | 38 | 4.26e-06 |
| AY146699 | 96.429 | 56 | 1.96e-14 |
| AY146699 | 97.368 | 38 | 4.26e-06 |