Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA032305.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Peptidase S10, serine carboxypeptidase |
Locus Name: | CSA032305.1 |
Gene Family
Peptidase_S10
Gene Attributes
Chromosome: | Sc0000349 |
Cds Coordinates: | 282739-298286 |
Nucleotide length: | 15547 |
Prodicted protein length: | 397 |
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
Null | Null | Null | Null | Null |
Signal Peptide
SP(Sec/SPI)
CS pos:28-29.
PFAM hits
Accession | Name | Match Start | Match End | E-value |
---|---|---|---|---|
PF00450.23 | 12 | 353 | Peptidase S10, serine carboxypeptidase | 1e-5 |
Interpro hits
Interpro Accession | Name | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR001563 | Pfam | 36 | 98 | Peptidase S10, serine carboxypeptidase |
IPR001563 | Pfam | 99 | 358 | Peptidase S10, serine carboxypeptidase |
IPR001563 | PANTHER | 173 | 354 | Peptidase S10, serine carboxypeptidase |
IPR029058 | SUPERFAMILY | 32 | 360 | Alpha/Beta hydrolase fold |
IPR029058 | Gene3D | 100 | 223 | Alpha/Beta hydrolase fold |
IPR029058 | Gene3D | 26 | 99 | Alpha/Beta hydrolase fold |
IPR001563 | PANTHER | 102 | 146 | Peptidase S10, serine carboxypeptidase |
IPR001563 | PANTHER | 15 | 98 | Peptidase S10, serine carboxypeptidase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
XM_028228454 | 97.794 | 544 | 0.0 |
XM_028228454 | 98.157 | 217 | 1.90e-100 |
XM_028228454 | 99.301 | 143 | 2.59e-64 |
XM_028228453 | 97.794 | 544 | 0.0 |
XM_028228453 | 97.279 | 294 | 1.40e-136 |
XM_028228453 | 99.301 | 143 | 2.59e-64 |
XM_028228452 | 97.794 | 544 | 0.0 |
XM_028228452 | 97.279 | 294 | 1.40e-136 |
XM_028228452 | 99.301 | 143 | 2.59e-64 |
XM_028215382 | 99.32 | 294 | 1.38e-146 |
XR_003643952 | 97.428 | 311 | 1.79e-145 |
XM_028215390 | 97.279 | 294 | 1.40e-136 |