Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA034896.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA034896.1 |
Gene Family
Myb_DNA-binding,Myb_DNA-bind_7,Myb_DNA-bind_6
Gene Attributes
| Chromosome: | Sc0000490 |
| Cds Coordinates: | 570539-582827 |
| Nucleotide length: | 12288 |
| Prodicted protein length: | 1836 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR009057 | SUPERFAMILY | 769 | 829 | Homeobox-like domain superfamily |
| IPR017884 | ProSiteProfiles | 1000 | 1051 | SANT domain |
| IPR009057 | SUPERFAMILY | 1002 | 1051 | Homeobox-like domain superfamily |
| IPR001005 | SMART | 1001 | 1049 | SANT/Myb domain |
| IPR001005 | SMART | 782 | 830 | SANT/Myb domain |
| IPR001005 | Pfam | 1005 | 1045 | SANT/Myb domain |
| IPR017884 | ProSiteProfiles | 781 | 832 | SANT domain |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028271148 | 99 | 5201 | 0.0 |
| XM_028271148 | 100 | 75 | 1.67e-27 |
| XM_028271148 | 100 | 75 | 1.67e-27 |
| XM_028271150 | 99.019 | 4487 | 0.0 |
| XM_028271150 | 98.884 | 717 | 0.0 |
| XM_028210884 | 95.327 | 107 | 2.12e-36 |
| XR_004652933 | 98.214 | 56 | 2.83e-15 |
| XR_004652932 | 98.214 | 56 | 2.83e-15 |
| XR_004652923 | 98.214 | 56 | 2.83e-15 |
| XR_002031672 | 98.214 | 56 | 2.83e-15 |
| XR_002031671 | 98.214 | 56 | 2.83e-15 |
| AM463926 | 98.214 | 56 | 2.83e-15 |
| AM453184 | 96.429 | 56 | 3.66e-14 |
| XR_786919 | 96.429 | 56 | 1.32e-13 |
| XR_786918 | 96.429 | 56 | 1.32e-13 |
| XR_002029350 | 96.429 | 56 | 1.32e-13 |
| XR_002029349 | 96.429 | 56 | 1.32e-13 |
| XR_002029369 | 97.619 | 42 | 1.71e-07 |
| XR_002029368 | 97.619 | 42 | 1.71e-07 |
| XR_002029367 | 97.619 | 42 | 1.71e-07 |
| XR_002029366 | 97.619 | 42 | 1.71e-07 |
| XR_002029365 | 97.619 | 42 | 1.71e-07 |
| XR_002029364 | 97.619 | 42 | 1.71e-07 |
| XR_002029363 | 97.619 | 42 | 1.71e-07 |
| XR_002029362 | 97.619 | 42 | 1.71e-07 |
| XR_002029361 | 97.619 | 42 | 1.71e-07 |
| XR_002029360 | 97.619 | 42 | 1.71e-07 |
| XR_002029359 | 97.619 | 42 | 1.71e-07 |
| XR_002029358 | 97.619 | 42 | 1.71e-07 |
| XR_784996 | 97.619 | 42 | 1.71e-07 |
| XR_002029357 | 97.619 | 42 | 1.71e-07 |
| XR_002029356 | 97.619 | 42 | 1.71e-07 |
| XM_019217992 | 97.619 | 42 | 1.71e-07 |
| XM_019217989 | 97.619 | 42 | 1.71e-07 |
| XM_019217988 | 97.619 | 42 | 1.71e-07 |
| XM_019217987 | 97.619 | 42 | 1.71e-07 |
| XR_004650526 | 95.238 | 42 | 7.97e-06 |
| XR_004650525 | 95.238 | 42 | 7.97e-06 |
| XR_004650524 | 95.238 | 42 | 7.97e-06 |
| XR_004650523 | 95.238 | 42 | 7.97e-06 |
| XR_004650522 | 95.238 | 42 | 7.97e-06 |
| XR_004650519 | 95.238 | 42 | 7.97e-06 |
| XR_004650518 | 95.238 | 42 | 7.97e-06 |
| XR_004650517 | 95.238 | 42 | 7.97e-06 |
| XR_004650516 | 95.238 | 42 | 7.97e-06 |