Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA006950.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA006950.1 |
Gene Family
DIOX_N,2OG-FeII_Oxy
Gene Attributes
| Chromosome: | Sc0001573 |
| Cds Coordinates: | 344082-355960 |
| Nucleotide length: | 11878 |
| Prodicted protein length: | 337 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR005123 | ProSiteProfiles | 198 | 297 | Oxoglutarate/iron-dependent dioxygenase |
| IPR027443 | Gene3D | 2 | 334 | Isopenicillin N synthase-like |
| IPR026992 | Pfam | 43 | 151 | Non-haem dioxygenase N-terminal domain |
| IPR005123 | Pfam | 202 | 297 | Oxoglutarate/iron-dependent dioxygenase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028197260 | 99.308 | 1011 | 0.0 |
| KY615706 | 99.11 | 1011 | 0.0 |
| JF343560 | 99.11 | 1011 | 0.0 |
| FJ577509 | 98.912 | 1011 | 0.0 |
| XM_028197259 | 99.009 | 807 | 0.0 |
| XM_028197259 | 99.535 | 215 | 2.07e-104 |