Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA035727.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA035727.1 |
Gene Family
Epimerase,3Beta_HSD,NAD_binding_10,NAD_binding_4,GDP_Man_Dehyd,NmrA,Polysacc_synt_2
Gene Attributes
| Chromosome: | Sc0000307 |
| Cds Coordinates: | 645641-651072 |
| Nucleotide length: | 5431 |
| Prodicted protein length: | 410 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001509 | Pfam | 173 | 324 | NAD-dependent epimerase/dehydratase |
| IPR036291 | SUPERFAMILY | 15 | 169 | NAD(P)-binding domain superfamily |
| IPR002225 | Pfam | 20 | 144 | 3-beta hydroxysteroid dehydrogenase/isomerase |
| IPR036291 | SUPERFAMILY | 172 | 386 | NAD(P)-binding domain superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028251603 | 99.86 | 715 | 0.0 |
| XM_028251603 | 99.613 | 517 | 0.0 |
| KY615691 | 99.58 | 715 | 0.0 |
| KY615691 | 99.42 | 517 | 0.0 |