Data Related Infomation
Camellia sinensis var. assamica cv. Yunkang10 CSA036366.1 KIB CSS Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: | CSA036366.1 |
KEGG Orthology
K15665 K23667 K15018 K14467 K15655 K02363 K24101 K05914 K04784 K04788 K15667 K13611 K15653 K16095 K16876 K16124 K16129 K16229 K16093 K23665 K21059 K12424 K15668 K12421 K16123 K12239 K12743 K19103 K12442 K15659 K16119 K00155 K16099 K08295 K18660 K19102 K16378 K15395 K10526 K01904 K01897 K18000 K15675 K15654 K04787 K15663 K15664 K16375 K15384 K15656 K15661 K02364 K16391 K22149 K01895 K12238 K23617 K16098 K21792 K12444 K04792 K04789 K12425 K16416 K12427 K15670 K22152 K12240 K22133 K12709 K04780 K16428 K00666 K12237 K16432 K18661 K02182 K12507 K04116 K18687 K22118 K15662 K14469 K16120 K16130 K16430 K16122 K16094 K15394 K15666 K16131 K22148 K22739 K03822 K16228 K12701 K15658 K16126 K15660 K16121
Gene Family
AMP-binding,AMP-binding_C
Gene Attributes
| Chromosome: | Sc0000653 |
| Cds Coordinates: | 461299-467104 |
| Nucleotide length: | 5805 |
| Prodicted protein length: | 554 |
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Name | Match Start | Match End | E-value |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Interpro hits
| Interpro Accession | Name | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR020845 | ProSitePatterns | 211 | 222 | AMP-binding, conserved site |
| IPR000873 | Pfam | 53 | 454 | AMP-dependent synthetase/ligase |
| IPR025110 | Pfam | 459 | 534 | AMP-binding enzyme, C-terminal domain |
| IPR042099 | Gene3D | 23 | 453 | AMP-dependent synthetase-like superfamily |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| XM_028196719 | 99.927 | 1364 | 0.0 |
| XM_028196719 | 99.669 | 302 | 1.49e-152 |
| KY615679 | 99.56 | 1364 | 0.0 |
| KY615679 | 99.669 | 302 | 1.49e-152 |
| DQ194356 | 98.462 | 1365 | 0.0 |
| DQ194356 | 98.366 | 306 | 5.41e-147 |
| XR_003645807 | 99.448 | 181 | 2.74e-85 |