Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV028708                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   Polyketide synthase, type III
Locus Name:   GWHPASIV028708

KEGG Orthology

K00660  K12644  K13232  K13233  K21384  K17211  K21386  K21385  K16167  K16233  K16231  K16424  K19580  K15431  K00648  K16232  K15397  K16872  K21378  K11608  K15311  K01641  K22317  K18003  

Gene Family

Chal_sti_synt_N

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
PANTHERPolyketide synthase, type III2388GO:0009058|GO:0016747
SUPERFAMILYThiolase-like235386GO:0016746
Gene3DThiolase-like236389GO:0016746
ProSitePatternsChalcone/stilbene synthase, active site156172GO:0009058|GO:0016746
Gene3DThiolase-like1235GO:0016746
PIRSFPolyketide synthase, type III2389GO:0009058|GO:0016747
SUPERFAMILYThiolase-like1233GO:0016746

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF00195Chalcone and stilbene synthases, N-terminal domain52281e-5
PF02797Chalcone and stilbene synthases, C-terminal domain2383871e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR011141PANTHER2388HYDROXYMETHYLGLUTARYL-COA SYNTHASE
IPR016039SUPERFAMILY235386Thiolase-like
IPR001099Pfam5228Chalcone and stilbene synthases, N-terminal domain
IPR016039Gene3D236389-
IPR012328Pfam238387Chalcone and stilbene synthases, C-terminal domain
IPR018088ProSitePatterns156172Chalcone and stilbene synthases active site.
IPR016039Gene3D1235-
IPR011141PIRSF2389PKS_III
-PANTHER2388CHALCONE SYNTHASE 2
IPR016039SUPERFAMILY1233Thiolase-like
-CDD16384CHS_like

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull