Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV007822                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   Polyketide synthase, type III
Locus Name:   GWHPASIV007822

KEGG Orthology

K00660  K13233  K13232  K12644  K21384  K21385  K17211  K21386  K16233  K16167  K16231  K16424  K19580  K15431  K00648  K15397  K16232  K21378  K11608  K16872  K12723  

Gene Family

Chal_sti_synt_N

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
PANTHERPolyketide synthase, type III8384GO:0009058|GO:0016747
SUPERFAMILYThiolase-like210382GO:0016746
Gene3DThiolase-like2230GO:0016746
Gene3DThiolase-like231386GO:0016746
PIRSFPolyketide synthase, type III5386GO:0009058|GO:0016747
SUPERFAMILYThiolase-like9228GO:0016746

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF02797Chalcone and stilbene synthases, C-terminal domain2333841e-5
PF00195Chalcone and stilbene synthases, N-terminal domain72231e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR012328Pfam233384Chalcone and stilbene synthases, C-terminal domain
-CDD13380CHS_like
IPR001099Pfam7223Chalcone and stilbene synthases, N-terminal domain
IPR011141PANTHER8384HYDROXYMETHYLGLUTARYL-COA SYNTHASE
IPR016039SUPERFAMILY210382Thiolase-like
IPR016039Gene3D2230-
IPR016039Gene3D231386-
-PANTHER8384TYPE III POLYKETIDE SYNTHASE B
IPR011141PIRSF5386PKS_III
IPR016039SUPERFAMILY9228Thiolase-like

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull