Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV007822 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Polyketide synthase, type III |
Locus Name: | GWHPASIV007822 |
KEGG Orthology
Gene Family
Chal_sti_synt_N
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
PANTHER | Polyketide synthase, type III | 8 | 384 | GO:0009058|GO:0016747 |
SUPERFAMILY | Thiolase-like | 210 | 382 | GO:0016746 |
Gene3D | Thiolase-like | 2 | 230 | GO:0016746 |
Gene3D | Thiolase-like | 231 | 386 | GO:0016746 |
PIRSF | Polyketide synthase, type III | 5 | 386 | GO:0009058|GO:0016747 |
SUPERFAMILY | Thiolase-like | 9 | 228 | GO:0016746 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF02797 | Chalcone and stilbene synthases, C-terminal domain | 233 | 384 | 1e-5 |
PF00195 | Chalcone and stilbene synthases, N-terminal domain | 7 | 223 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR012328 | Pfam | 233 | 384 | Chalcone and stilbene synthases, C-terminal domain |
- | CDD | 13 | 380 | CHS_like |
IPR001099 | Pfam | 7 | 223 | Chalcone and stilbene synthases, N-terminal domain |
IPR011141 | PANTHER | 8 | 384 | HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
IPR016039 | SUPERFAMILY | 210 | 382 | Thiolase-like |
IPR016039 | Gene3D | 2 | 230 | - |
IPR016039 | Gene3D | 231 | 386 | - |
- | PANTHER | 8 | 384 | TYPE III POLYKETIDE SYNTHASE B |
IPR011141 | PIRSF | 5 | 386 | PKS_III |
IPR016039 | SUPERFAMILY | 9 | 228 | Thiolase-like |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |