Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV007853 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Arginine decarboxylase |
Locus Name: | GWHPASIV007853 |
Gene Family
Orn_Arg_deC_N
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
TIGRFAM | Arginine decarboxylase | 49 | 679 | GO:0006527|GO:0008295|GO:0008792 |
Gene3D | Alanine racemase/group IV decarboxylase, C-terminal | 58 | 608 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 294 | 307 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 151 | 169 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 175 | 187 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 389 | 408 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 586 | 599 | GO:0003824 |
Pfam | Orn/DAP/Arg decarboxylase 2, N-terminal | 146 | 399 | GO:0003824 |
CDD | Arginine decarboxylase | 110 | 607 | GO:0006527|GO:0008295|GO:0008792 |
PIRSF | Arginine decarboxylase | 35 | 686 | GO:0006527|GO:0008295|GO:0008792 |
PANTHER | Arginine decarboxylase | 1 | 690 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 119 | 134 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 530 | 555 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 505 | 526 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 143 | 157 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 227 | 248 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 201 | 216 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 251 | 273 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 379 | 396 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 586 | 607 | GO:0006527|GO:0008295|GO:0008792 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | 146 | 399 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
- | PANTHER | 1 | 690 | ARGININE DECARBOXYLASE |
- | Gene3D | 419 | 498 | - |
IPR002985 | TIGRFAM | 49 | 679 | speA: arginine decarboxylase |
IPR009006 | Gene3D | 58 | 608 | Lyase |
IPR000183 | PRINTS | 294 | 307 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR000183 | PRINTS | 151 | 169 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR000183 | PRINTS | 175 | 187 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR000183 | PRINTS | 389 | 408 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR000183 | PRINTS | 586 | 599 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR029066 | Gene3D | 120 | 401 | Alanine racemase |
IPR022644 | Pfam | 146 | 399 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain |
IPR022653 | ProSitePatterns | 151 | 169 | Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. |
IPR002985 | CDD | 110 | 607 | PLPDE_III_ADC |
IPR029066 | SUPERFAMILY | 120 | 401 | PLP-binding barrel |
IPR002985 | PIRSF | 35 | 686 | ARGDC |
IPR022657 | ProSitePatterns | 332 | 345 | Orn/DAP/Arg decarboxylases family 2 signature 2. |
IPR002985 | PANTHER | 1 | 690 | ARGININE DECARBOXYLASE |
IPR002985 | PRINTS | 119 | 134 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 530 | 555 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 505 | 526 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 143 | 157 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 227 | 248 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 201 | 216 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 251 | 273 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 379 | 396 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 586 | 607 | Arginine decarboxylase signature |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |