Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV014419 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Phenylalanine/histidine ammonia-lyases, active site |
| Locus Name: | GWHPASIV014419 |
Gene Family
Lyase_aromatic
Gene Attributes
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| ProSitePatterns | Phenylalanine/histidine ammonia-lyases, active site | 193 | 209 | GO:0016841 |
| SUPERFAMILY | L-Aspartase-like | 20 | 711 | GO:0003824 |
| TIGRFAM | Phenylalanine ammonia-lyase | 20 | 701 | GO:0005737|GO:0006559|GO:0016841 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Annotation | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00221 | Aromatic amino acid lyase | 58 | 525 | 1e-5 |
Interpro hits
| Interpro Accession | Database | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR001106 | CDD | 56 | 521 | PAL-HAL |
| IPR022313 | ProSitePatterns | 193 | 209 | Phenylalanine and histidine ammonia-lyases signature. |
| - | PANTHER | 16 | 711 | PHENYLALANINE AMMONIA-LYASE 1-LIKE |
| IPR023144 | Gene3D | 524 | 638 | - |
| IPR024083 | Gene3D | 19 | 257 | - |
| IPR001106 | PANTHER | 16 | 711 | HISTIDINE AMMONIA-LYASE |
| IPR008948 | SUPERFAMILY | 20 | 711 | L-aspartase-like |
| - | Gene3D | 258 | 700 | Fumarase/aspartase (Central domain) |
| IPR001106 | Pfam | 58 | 525 | Aromatic amino acid lyase |
| IPR005922 | TIGRFAM | 20 | 701 | phe_am_lyase: phenylalanine ammonia-lyase |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |