Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV018195                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   Paired amphipathic helix superfamily
Locus Name:   GWHPASIV018195

KEGG Orthology

K11644  K23213  K23804  K22381  K12751  

Gene Family

PAH

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
Gene3DPaired amphipathic helix superfamily84157GO:0006355
Gene3DPaired amphipathic helix superfamily1470GO:0006355
SUPERFAMILYPaired amphipathic helix superfamily85156GO:0006355
PfamPaired amphipathic helix2569GO:0006355
PfamPaired amphipathic helix110154GO:0006355
SUPERFAMILYPaired amphipathic helix superfamily1471GO:0006355
ProSiteProfilesPaired amphipathic helix85157GO:0006355
PfamXS domain199245GO:0031047
ProSiteProfilesPaired amphipathic helix372GO:0006355
PANTHERTranscriptional regulatory protein Sin3-like15196GO:0003714

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF02671Paired amphipathic helix repeat25691e-5
PF02671Paired amphipathic helix repeat1101541e-5
PF03468XS domain1992451e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR036600Gene3D84157PAH2 domain
IPR036600Gene3D1470PAH2 domain
IPR036600SUPERFAMILY85156PAH2 domain
-PANTHER15196HISTONE DEACETYLASE INTERACTING DOMAIN, SIN3-RELATED
IPR003822Pfam2569Paired amphipathic helix repeat
IPR003822Pfam110154Paired amphipathic helix repeat
IPR036600SUPERFAMILY1471PAH2 domain
IPR003822ProSiteProfiles85157PAH domain profile.
IPR005380Pfam199245XS domain
IPR038588Gene3D178250-
IPR003822ProSiteProfiles372PAH domain profile.
IPR039774PANTHER15196SIN3B-RELATED

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull