Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV018912                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Gene Identification

Gene Product Name:   Paired amphipathic helix superfamily
Locus Name:   GWHPASIV018912

KEGG Orthology

K11644  K23213  K23804  K03949  K06872  K22381  K09357  K11128  K11294  K07803  

Gene Family

PAH

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
Gene3DPaired amphipathic helix superfamily146219GO:0006355
PfamPaired amphipathic helix87131GO:0006355
PfamPaired amphipathic helix172216GO:0006355
Gene3DPaired amphipathic helix superfamily70131GO:0006355
SUPERFAMILYPaired amphipathic helix superfamily62132GO:0006355
ProSiteProfilesPaired amphipathic helix64134GO:0006355
ProSiteProfilesPaired amphipathic helix149219GO:0006355
SUPERFAMILYPaired amphipathic helix superfamily146218GO:0006355
PANTHERTranscriptional regulatory protein Sin3-like25301GO:0003714

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF02671Paired amphipathic helix repeat871311e-5
PF02671Paired amphipathic helix repeat1722161e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR036600Gene3D146219PAH2 domain
-MobiDBLite373392consensus disorder prediction
IPR003822Pfam87131Paired amphipathic helix repeat
IPR003822Pfam172216Paired amphipathic helix repeat
-PANTHER25301HISTONE DEACETYLASE INTERACTING DOMAIN, SIN3-RELATED
IPR036600Gene3D70131PAH2 domain
IPR036600SUPERFAMILY62132PAH2 domain
IPR003822ProSiteProfiles64134PAH domain profile.
IPR003822ProSiteProfiles149219PAH domain profile.
IPR036600SUPERFAMILY146218PAH2 domain
IPR039774PANTHER25301SIN3B-RELATED

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull