Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV021444 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | Orn/DAP/Arg decarboxylase 2, N-terminal |
| Locus Name: | GWHPASIV021444 |
Gene Family
Orn_Arg_deC_N
Gene Attributes
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Pfam | Orn/DAP/Arg decarboxylase 2, N-terminal | 141 | 398 | GO:0003824 |
| Gene3D | Alanine racemase/group IV decarboxylase, C-terminal | 57 | 607 | GO:0003824 |
| TIGRFAM | Arginine decarboxylase | 49 | 676 | GO:0006527|GO:0008295|GO:0008792 |
| CDD | Arginine decarboxylase | 109 | 604 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Ornithine/DAP/Arg decarboxylase | 150 | 168 | GO:0003824 |
| PRINTS | Ornithine/DAP/Arg decarboxylase | 583 | 596 | GO:0003824 |
| PRINTS | Ornithine/DAP/Arg decarboxylase | 174 | 186 | GO:0003824 |
| PRINTS | Ornithine/DAP/Arg decarboxylase | 293 | 306 | GO:0003824 |
| PRINTS | Ornithine/DAP/Arg decarboxylase | 388 | 407 | GO:0003824 |
| PIRSF | Arginine decarboxylase | 38 | 679 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 250 | 272 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 529 | 554 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 583 | 604 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 226 | 247 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 200 | 215 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 378 | 395 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 118 | 133 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 142 | 156 | GO:0006527|GO:0008295|GO:0008792 |
| PRINTS | Arginine decarboxylase | 504 | 525 | GO:0006527|GO:0008295|GO:0008792 |
| SUPERFAMILY | Alanine racemase/group IV decarboxylase, C-terminal | 494 | 608 | GO:0003824 |
| PANTHER | Arginine decarboxylase | 1 | 720 | GO:0006527|GO:0008295|GO:0008792 |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Annotation | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | 141 | 398 | 1e-5 |
Interpro hits
| Interpro Accession | Database | Match Start | Match End | Annotation |
|---|---|---|---|---|
| IPR022644 | Pfam | 141 | 398 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain |
| IPR009006 | Gene3D | 57 | 607 | Lyase |
| IPR002985 | TIGRFAM | 49 | 676 | speA: arginine decarboxylase |
| IPR002985 | CDD | 109 | 604 | PLPDE_III_ADC |
| IPR000183 | PRINTS | 150 | 168 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
| IPR000183 | PRINTS | 583 | 596 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
| IPR000183 | PRINTS | 174 | 186 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
| IPR000183 | PRINTS | 293 | 306 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
| IPR000183 | PRINTS | 388 | 407 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
| IPR002985 | PIRSF | 38 | 679 | ARGDC |
| - | PANTHER | 1 | 720 | ARGININE DECARBOXYLASE |
| IPR002985 | PRINTS | 250 | 272 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 529 | 554 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 583 | 604 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 226 | 247 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 200 | 215 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 378 | 395 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 118 | 133 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 142 | 156 | Arginine decarboxylase signature |
| IPR002985 | PRINTS | 504 | 525 | Arginine decarboxylase signature |
| IPR009006 | SUPERFAMILY | 494 | 608 | Alanine racemase C-terminal domain-like |
| IPR022653 | ProSitePatterns | 150 | 168 | Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. |
| IPR029066 | Gene3D | 119 | 400 | Alanine racemase |
| IPR002985 | PANTHER | 1 | 720 | ARGININE DECARBOXYLASE |
| IPR022657 | ProSitePatterns | 331 | 344 | Orn/DAP/Arg decarboxylases family 2 signature 2. |
| - | Gene3D | 417 | 497 | - |
| IPR029066 | SUPERFAMILY | 119 | 400 | PLP-binding barrel |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |