Data Related Infomation

Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV027731                   FAFU Release 1 Annotation

DNA Coding Sequence & Protein Sequence

Click here download sequences in FASTA format.

Gene Identification

Gene Product Name:   Leucine-rich repeat
Locus Name:   GWHPASIV027731

KEGG Orthology

K13466  K13420  K13465  K13468  K13471  K13470  K13416  K13446  K13428  K13437  K08844  K12796  K16340  K08399  K19613  K13415  K13459  K17256  K04306  K20718  K24055  K16224  K04308  K13457  K10159  K04309  K06839  K08462  K05401  K06838  K18809  K13023  K20599  K13418  K18807  K23533  K06555  K14142  K20359  K22038  K04307  K08120  K08119  K08843  K13417  K17550  K18808  K10348  K08123  K06850  K04247  K10641  K16351  K24492  K08118  K10130  K24500  K06260  K08460  K13460  K16665  K10160  K10168  K16360  K16661  K06261  K08121  K20237  K16362  K08461  K00924  K04391  K10169  K15069  K08125  K12800  K20230  K20865  K10278  K22529  K14050  K10171  K16660  K16354  K08130  K16659  K16358  K16355  K17576  K10350  K12805  K24493  K16356  K08127  K16357  K04249  K20493  K16606  K08128  K22449  K08124  K15353  K16634  K18647  K24491  K16717  K16666  K24095  K16226  K23946  K14319  K16770  K18648  K10285  K10276  K13453  K17579  K19750  K04985  K04360  K12807  K17568  K05101  K19999  

Gene Family

LRR_8

Gene Attributes

No Gene Attributes Found

Gene Ontology Classification

Database Annotation Match Start Match End GO
ProSiteProfilesLeucine-rich repeat220241GO:0005515
ProSiteProfilesLeucine-rich repeat803824GO:0005515
ProSiteProfilesLeucine-rich repeat292315GO:0005515
ProSiteProfilesLeucine-rich repeat385407GO:0005515
ProSiteProfilesLeucine-rich repeat921942GO:0005515
PfamLeucine-rich repeat609622GO:0005515
ProSiteProfilesLeucine-rich repeat244266GO:0005515
ProSiteProfilesLeucine-rich repeat897919GO:0005515
ProSiteProfilesLeucine-rich repeat486508GO:0005515
ProSiteProfilesLeucine-rich repeat462484GO:0005515
ProSiteProfilesLeucine-rich repeat361382GO:0005515
ProSiteProfilesLeucine-rich repeat945967GO:0005515
ProSiteProfilesLeucine-rich repeat608630GO:0005515
ProSiteProfilesLeucine-rich repeat337360GO:0005515
PfamLeucine-rich repeat946963GO:0005515
PfamLeucine-rich repeat113132GO:0005515
ProSiteProfilesLeucine-rich repeat510531GO:0005515
ProSiteProfilesLeucine-rich repeat113134GO:0005515
PfamLeucine-rich repeat337396GO:0005515
PfamLeucine-rich repeat219278GO:0005515
PfamLeucine-rich repeat754814GO:0005515
PfamLeucine-rich repeat682741GO:0005515
ProSiteProfilesLeucine-rich repeat730751GO:0005515
ProSiteProfilesLeucine-rich repeat779801GO:0005515
ProSiteProfilesLeucine-rich repeat682704GO:0005515

Signal Peptide

No Signal Peptide Found

PFAM hits

Accession Annotation Match Start Match End E-value
PF13516Leucine Rich repeat6096221e-5
PF08263Leucine rich repeat N-terminal domain37741e-5
PF00560Leucine Rich Repeat9469631e-5
PF00560Leucine Rich Repeat1131321e-5
PF13855Leucine rich repeat3373961e-5
PF13855Leucine rich repeat2192781e-5
PF13855Leucine rich repeat7548141e-5
PF13855Leucine rich repeat6827411e-5

Interpro hits

Interpro Accession Database Match Start Match End Annotation
IPR032675Gene3D214310Ribonuclease Inhibitor
IPR001611ProSiteProfiles220241Leucine-rich repeat profile.
IPR001611ProSiteProfiles803824Leucine-rich repeat profile.
IPR032675Gene3D311430Ribonuclease Inhibitor
IPR001611ProSiteProfiles292315Leucine-rich repeat profile.
IPR001611ProSiteProfiles385407Leucine-rich repeat profile.
-PANTHER4871046LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED
IPR001611ProSiteProfiles921942Leucine-rich repeat profile.
IPR001611Pfam609622Leucine Rich repeat
IPR001611ProSiteProfiles244266Leucine-rich repeat profile.
-PANTHER4871046LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2
IPR001611ProSiteProfiles897919Leucine-rich repeat profile.
IPR001611ProSiteProfiles486508Leucine-rich repeat profile.
IPR001611ProSiteProfiles462484Leucine-rich repeat profile.
IPR032675Gene3D508991Ribonuclease Inhibitor
IPR001611ProSiteProfiles361382Leucine-rich repeat profile.
IPR003591SMART801824LRR_typ_2
IPR003591SMART218241LRR_typ_2
IPR003591SMART359382LRR_typ_2
IPR003591SMART895919LRR_typ_2
IPR003591SMART290313LRR_typ_2
IPR003591SMART383407LRR_typ_2
IPR003591SMART111134LRR_typ_2
IPR003591SMART242266LRR_typ_2
IPR003591SMART943976LRR_typ_2
IPR003591SMART484508LRR_typ_2
IPR001611ProSiteProfiles945967Leucine-rich repeat profile.
-PANTHER34328LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2
-PANTHER34328LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED
IPR001611ProSiteProfiles608630Leucine-rich repeat profile.
-SUPERFAMILY98430RNI-like
IPR001611ProSiteProfiles337360Leucine-rich repeat profile.
IPR032675Gene3D30213Ribonuclease Inhibitor
IPR013210Pfam3774Leucine rich repeat N-terminal domain
-PANTHER329500LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2-RELATED
IPR001611Pfam946963Leucine Rich Repeat
IPR001611Pfam113132Leucine Rich Repeat
-PANTHER329500LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2
-SUPERFAMILY437673L domain-like
IPR032675Gene3D431507Ribonuclease Inhibitor
-PRINTS801814Leucine-rich repeat signature
-PRINTS487500Leucine-rich repeat signature
IPR001611ProSiteProfiles510531Leucine-rich repeat profile.
IPR001611ProSiteProfiles113134Leucine-rich repeat profile.
IPR001611Pfam337396Leucine rich repeat
IPR001611Pfam219278Leucine rich repeat
IPR001611Pfam754814Leucine rich repeat
IPR001611Pfam682741Leucine rich repeat
-SUPERFAMILY636980L domain-like
IPR001611ProSiteProfiles730751Leucine-rich repeat profile.
IPR001611ProSiteProfiles779801Leucine-rich repeat profile.
IPR001611ProSiteProfiles682704Leucine-rich repeat profile.

Gene Structure

Blastn Searches(aligned nr database from NCBI)

Accession(nr database) %Identity Length E-value
NullNullNullNull