Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV029400 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Arginine decarboxylase |
Locus Name: | GWHPASIV029400 |
Gene Family
Orn_Arg_deC_N
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
PRINTS | Arginine decarboxylase | 59 | 74 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 167 | 187 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 141 | 156 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Arginine decarboxylase | 83 | 97 | GO:0006527|GO:0008295|GO:0008792 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 115 | 127 | GO:0003824 |
PRINTS | Ornithine/DAP/Arg decarboxylase | 91 | 109 | GO:0003824 |
Pfam | Orn/DAP/Arg decarboxylase 2, N-terminal | 84 | 174 | GO:0003824 |
PANTHER | Arginine decarboxylase | 17 | 174 | GO:0006527|GO:0008295|GO:0008792 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF02784 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain | 84 | 174 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
IPR029066 | SUPERFAMILY | 60 | 175 | PLP-binding barrel |
IPR002985 | PRINTS | 59 | 74 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 167 | 187 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 141 | 156 | Arginine decarboxylase signature |
IPR002985 | PRINTS | 83 | 97 | Arginine decarboxylase signature |
IPR000183 | PRINTS | 115 | 127 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR000183 | PRINTS | 91 | 109 | Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature |
IPR022644 | Pfam | 84 | 174 | Pyridoxal-dependent decarboxylase, pyridoxal binding domain |
- | PANTHER | 17 | 174 | ARGININE DECARBOXYLASE |
IPR029066 | Gene3D | 60 | 179 | Alanine racemase |
IPR002985 | PANTHER | 17 | 174 | ARGININE DECARBOXYLASE |
IPR022653 | ProSitePatterns | 91 | 109 | Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |