Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV032361 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
Gene Product Name: | Phenylalanine ammonia-lyase |
Locus Name: | GWHPASIV032361 |
Gene Family
Lyase_aromatic
Gene Attributes
Gene Ontology Classification
Database | Annotation | Match Start | Match End | GO |
---|---|---|---|---|
TIGRFAM | Phenylalanine ammonia-lyase | 23 | 704 | GO:0005737|GO:0006559|GO:0016841 |
SUPERFAMILY | L-Aspartase-like | 23 | 714 | GO:0003824 |
ProSitePatterns | Phenylalanine/histidine ammonia-lyases, active site | 196 | 212 | GO:0016841 |
Signal Peptide
No Signal Peptide Found
PFAM hits
Accession | Annotation | Match Start | Match End | E-value |
---|---|---|---|---|
PF00221 | Aromatic amino acid lyase | 61 | 528 | 1e-5 |
Interpro hits
Interpro Accession | Database | Match Start | Match End | Annotation |
---|---|---|---|---|
- | PANTHER | 17 | 714 | PHENYLALANINE AMMONIA-LYASE 1-LIKE |
IPR005922 | TIGRFAM | 23 | 704 | phe_am_lyase: phenylalanine ammonia-lyase |
IPR008948 | SUPERFAMILY | 23 | 714 | L-aspartase-like |
IPR022313 | ProSitePatterns | 196 | 212 | Phenylalanine and histidine ammonia-lyases signature. |
IPR024083 | Gene3D | 22 | 260 | - |
IPR001106 | PANTHER | 17 | 714 | HISTIDINE AMMONIA-LYASE |
IPR001106 | CDD | 59 | 524 | PAL-HAL |
- | Gene3D | 261 | 703 | Fumarase/aspartase (Central domain) |
IPR001106 | Pfam | 61 | 528 | Aromatic amino acid lyase |
IPR023144 | Gene3D | 527 | 641 | - |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
Accession(nr database) | %Identity | Length | E-value |
---|---|---|---|
Null | Null | Null | Null |