Camellia sinensis var. sinensis cv. Tieguanyin                  GWHPASIV045313                   FAFU Release 1 Annotation

Click here download sequences in FASTA format.

Gene Product Name:	DEAD/DEAH box helicase domain
Locus Name:	GWHPASIV045313

K18663  K12854  K18664  K15271  K19178  K02349  K03727  K03726  K12599  K03724  K20103  K06877  K09540  K14807  K18959  K17675  K19466  K14810  K18655  K12647  K14777  K20096  K14809  K10730  K14811  K18692  K11592  K12835  K13183  K12646  K14779  K17679  K14805  K13179  K01156  K14806  K05590  K19789  K17678  K11927  K16911  K13181  K05591  K03732  K12811  K03579  K13025  K03655  K10899  K02240  K03170  K14808  K10844  K10896  K10902  K10900  K09384  K14635  K03205  K03257  K10725  K14776  K12823  K14414  K04484  K12063  K03196  K11594  K00383  K20527  K13177  K09882  K10901  K03544  K14326  K04748  K12858  K02504  K02454  

Sec63

No Gene Attributes Found

Database	Annotation	Match Start	Match End	GO
Pfam	DEAD/DEAH box helicase domain	444	617	GO:0003676|GO:0005524
Pfam	DEAD/DEAH box helicase domain	1292	1457	GO:0003676|GO:0005524

No Signal Peptide Found

Accession	Annotation	Match Start	Match End	E-value
PF02889	Sec63 Brl domain	1773	2084	1e-5
PF00270	DEAD/DEAH box helicase	444	617	1e-5
PF00270	DEAD/DEAH box helicase	1292	1457	1e-5
PF00271	Helicase conserved C-terminal domain	1562	1655	1e-5
PF00271	Helicase conserved C-terminal domain	700	819	1e-5
PF02889	Sec63 Brl domain	942	1249	1e-5

Interpro Accession	Database	Match Start	Match End	Annotation
IPR004179	Pfam	1773	2084	Sec63 Brl domain
-	PIRSF	19	2088	BRR2
IPR035892	Gene3D	1144	1253	-
IPR014001	ProSiteProfiles	1299	1474	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
IPR011545	Pfam	444	617	DEAD/DEAH box helicase
IPR011545	Pfam	1292	1457	DEAD/DEAH box helicase
IPR001650	Pfam	1562	1655	Helicase conserved C-terminal domain
IPR001650	Pfam	700	819	Helicase conserved C-terminal domain
IPR003593	SMART	1304	1477	AAA_5
IPR003593	SMART	456	773	AAA_5
-	CDD	441	637	DEXHc_ASCC3_1
-	CDD	1481	1669	SF2_C_Ski2
IPR027417	SUPERFAMILY	1476	1685	P-loop containing nucleoside triphosphate hydrolases
-	PANTHER	431	471	SEC63 DOMAIN-CONTAINING
IPR036390	SUPERFAMILY	1685	1785	"Winged helix" DNA-binding domain
IPR027417	SUPERFAMILY	392	626	P-loop containing nucleoside triphosphate hydrolases
IPR001650	ProSiteProfiles	668	866	Superfamilies 1 and 2 helicase C-terminal domain profile.
-	SUPERFAMILY	1806	1972	Sec63 N-terminal domain-like
-	CDD	641	832	SF2_C_Ski2
-	PANTHER	431	471	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3
-	PANTHER	472	2085	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3
-	Gene3D	943	1085	-
IPR014001	ProSiteProfiles	451	633	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
-	Gene3D	1688	1778	-
IPR027417	SUPERFAMILY	636	849	P-loop containing nucleoside triphosphate hydrolases
-	Gene3D	642	844	-
-	Gene3D	1254	1481	-
-	CDD	1289	1477	DEXHc_ASCC3_2
-	Gene3D	1483	1687	-
-	Gene3D	433	641	-
IPR004179	Pfam	942	1249	Sec63 Brl domain
-	PANTHER	472	2085	SEC63 DOMAIN-CONTAINING
-	Gene3D	851	942	-
IPR004179	SMART	1773	2086	Sec63_2
IPR004179	SMART	942	1250	Sec63_2
-	Gene3D	1087	1141	5' to 3' exonuclease
IPR014001	SMART	438	649	ultradead3
IPR014001	SMART	1286	1490	ultradead3
IPR035892	Gene3D	1976	2088	-
-	Gene3D	1779	1917	-
IPR036390	SUPERFAMILY	849	954	"Winged helix" DNA-binding domain
IPR027417	SUPERFAMILY	1176	1474	P-loop containing nucleoside triphosphate hydrolases
IPR001650	ProSiteProfiles	1506	1714	Superfamilies 1 and 2 helicase C-terminal domain profile.
IPR001650	SMART	729	821	helicmild6
IPR001650	SMART	1565	1657	helicmild6
IPR014756	SUPERFAMILY	1991	2084	E set domains
-	SUPERFAMILY	970	1145	Sec63 N-terminal domain-like

Accession(nr database)	%Identity	Length	E-value
Null	Null	Null	Null