Data Related Infomation
Camellia sinensis var. sinensis cv. Tieguanyin GWHPASIV045473 FAFU Release 1 Annotation
DNA Coding Sequence & Protein Sequence
Gene Identification
| Gene Product Name: | No Gene Product Found |
| Locus Name: |
KEGG Orthology
Gene Family
Hist_deacetyl
Gene Attributes
Gene Ontology Classification
| Database | Annotation | Match Start | Match End | GO |
|---|---|---|---|---|
| Null | Null | Null | Null | Null |
Signal Peptide
No Signal Peptide Found
PFAM hits
| Accession | Annotation | Match Start | Match End | E-value |
|---|---|---|---|---|
| PF00850 | Histone deacetylase domain | 204 | 492 | 1e-5 |
Interpro hits
| Interpro Accession | Database | Match Start | Match End | Annotation |
|---|---|---|---|---|
| - | PANTHER | 60 | 584 | HISTONE DEACETYLASE |
| - | PANTHER | 60 | 584 | HISTONE DEACETYLASE-RELATED |
| IPR023696 | SUPERFAMILY | 180 | 527 | Arginase/deacetylase |
| - | MobiDBLite | 1 | 25 | consensus disorder prediction |
| IPR037138 | Gene3D | 177 | 556 | - |
| IPR023801 | Pfam | 204 | 492 | Histone deacetylase domain |
| IPR001876 | ProSitePatterns | 116 | 135 | Zinc finger RanBP2-type signature. |
| IPR000286 | PRINTS | 339 | 354 | Histone deacetylase superfamily signature |
| IPR000286 | PRINTS | 427 | 437 | Histone deacetylase superfamily signature |
| IPR000286 | PRINTS | 306 | 329 | Histone deacetylase superfamily signature |
| - | CDD | 204 | 494 | HDAC_classII |
Gene Structure
Blastn Searches(aligned nr database from NCBI)
| Accession(nr database) | %Identity | Length | E-value |
|---|---|---|---|
| Null | Null | Null | Null |